Algorithms and Data Structures for Biology
Bachelor Degree in Genomics
Synopsis
Introduction to the Course
[
Slides
]
Algorithms and their Complexity
[
Slides
]
Chapter 1 from [1]
Exhaustive Search Algorithms
[
Slides
]
Chapter 3 from [1]
Greedy Algorithms
[
Slides
]
Chapter 4 from [1]
Dynamic Programming Algorithms
[
Slides
]
Chapter 5 from [1]
Divide and Conquer Algorithms
[
Slides
]
Chapter 5 from [1]
Course Bibliography
[1]
N. Jones, P. Pevzner.
An Introduction to Bioinformatics Algorithms
. MIT Press, 2004. [
WebPage
]
[2]
T. Oetiker, H. Partl, I. Hyna, E. Schlegl.
The Not so Short Introduction to LaTeX 2e
. 2018. [
pdf
]
Lab Sessions
First Assignment
, March 11th, 2019, [
pdf
]
Third Assignment
, March 25th, 2019, [
pdf
]
Fourth Assignment
, April 1st, 2019, [
pdf
,
tex
]
Fifth Assignment
, April 16th, 2019, [
pdf
], Evaluation [
pdf
]
Sixth Assignment
, May 6th, 2019, [
pdf
]
Seventh Assignment
, May 10th, 2019, [
pdf
]
Eight Assignment
, May 13th, 2019, [
pdf
], Instances [
py
], Evaluation [
pdf
]